Number of publications: 14
Revealing the unseen: 3D synchrotron X-Ray imaging of uterine vasculature in adenomyosis
Veerle M. W. Michels, Adam Szmul, Joseph Jacob, Hector Dejea, Bernadette S. de Bakker, Judith A. F. Huirne, HOAHub Uterine Consortium, Yousif Dawood, Daniël Docter, Lynda J. M. Juffermans, Nicole B. Burger, Richard A. Schoonhoven, Jermo Hanemaaijer - van der Veer, Naem Donner, Daisuke Yamada, Ryoko Egashira, Shahab Aslani, Stijn E. Verleden, Joseph Brunet, Theresa Urban, Joanna Purzycka, Ruikang Xue, Claire L. Walsh, Peter D. Lee, Paul Tafforeau (2025)
DOI:10.1007/s10456-025-10004-w
Fast segmentation with the NextBrain histological atlas
Oula Puonti, Jackson Nolan, Robert Dicamillo, Yael Balbastre, Adria Casamitjana, Matteo Mancini, Eleanor Robinson, Loic Peter, Roberto Annunziata, Juri Althonayan, Shauna Crampsie, Emily Blackburn, Benjamin Billot, Alessia Atzeni, Peter Schmidt, James Hughes, Jean Augustinack, Brian Edlow, Lilla Zöllei, David L Thomas, Dorit Kliemann, Martina Bocchetta, Catherine Strand, Janice Holton, Zane Jaunmuktane, Juan Eugenio Iglesias (2025)
DOI:10.1101/2025.09.22.673638
Mapping the arterial vascular network in an intact human kidney using hierarchical phase-contrast tomography
Shahrokh Rahmani, Daniyal J. Jafree, Peter D. Lee, Paul Tafforeau, Joseph Brunet, Sonal Nandanwar, Yang Zhou, Joseph Jacob, Alexandre Bellier, Maximilian Ackermann, Danny D. Jonigk, Rebecca J. Shipley, David A. Long, Claire L. Walsh (2025)
DOI:10.1038/s44303-025-00090-2
The anatomy of atrial conduction: A review of anatomic landmarks integrated with computed tomographic virtual dissection to provide a road map for right atrial pacing
Justin T. Tretter, Shunmuga Sundaram Ponnusamy, Pugazhendhi Vijayaraman, Andrew C. Cook, Damián Sánchez-Quintana, Robert H. Anderson, Shlomo Ben-Haim (2025)
DOI:10.1016/j.hrthm.2025.09.032
The Anatomy of the Atrioventricular Node
Robert H. Anderson, Damián Sánchez-Quintana, Jorge Nevado-Medina, Diane E. Spicer, Justin T. Tretter, Wouter H. Lamers, Zihan Hu, Andrew C. Cook, Eduardo Back Sternick, Demosthenes G. Katritsis (2025)
DOI:10.3390/jcdd12070245
Multiscale Segmentation using Hierarchical Phase-contrast Tomography and Deep Learning
Yang Zhou, Shahab Aslani, Yousef Javanmardi, Joseph Brunet, David Stansby, Saskia Carroll, Alexandre Bellier, Maximilian Ackermann, Paul Tafforeau, Peter D. Lee, Claire L. Walsh (2025)
DOI:10.1101/2025.05.15.654263
Life beyond labels
Caroline Seydel (2025)
DOI:10.1038/s41592-025-02649-8
Deep learning for 3D vascular segmentation in hierarchical phase contrast tomography: a case study on kidney
Ekin Yagis, Shahab Aslani, Yashvardhan Jain, Yang Zhou, Shahrokh Rahmani, Joseph Brunet, Alexandre Bellier, Christopher Werlein, Maximilian Ackermann, Danny Jonigk, Paul Tafforeau, Peter D. Lee, Claire L. Walsh (2024)
DOI:10.1038/s41598-024-77582-5
Micro to macro scale anatomical analysis of the human hippocampal arteries with synchrotron hierarchical phase-contrast tomography
Alexandre Bellier, P. Tafforeau, A. Bouziane, T. Angelloz-Nicoud, P. D. Lee, C. Walsh (2024)
DOI:10.1007/s00276-024-03467-x
Vasculature segmentation in 3D hierarchical phase-contrast tomography images of human kidneys
Yashvardhan Jain, Claire L. Walsh, Ekin Yagis, Shahab Aslani, Sonal Nandanwar, Yang Zhou, Juhyung Ha, Katherine S. Gustilo, Joseph Brunet, Shahrokh Rahmani, Paul Tafforeau, Alexandre Bellier, Griffin M. Weber, Peter D. Lee, Katy Börner (2024)
DOI:10.1101/2024.08.25.609595
Multidimensional Analysis of the Adult Human Heart in Health and Disease Using Hierarchical Phase-Contrast Tomography
Joseph Brunet, Andrew C. Cook, Claire L. Walsh, James Cranley, Paul Tafforeau, Klaus Engel, Owen Arthurs, Camille Berruyer, Emer Burke O’Leary, Alexandre Bellier, Ryo Torii, Christopher Werlein, Danny D. Jonigk, Maximilian Ackermann, Kathleen Dollman, Peter D. Lee (2024)
DOI:10.1148/radiol.232731
Guided Training of NeRFs for Medical Volume Rendering
Kaloian Petkov (2023)
DOI:10.1145/3588028.3603657
A multiscale X-ray phase-contrast tomography dataset of a whole human left lung
R. Patrick Xian, Claire L. Walsh, Stijn E. Verleden, Willi L. Wagner, Alexandre Bellier, Sebastian Marussi, Maximilian Ackermann, Danny D. Jonigk, Joseph Jacob, Peter D. Lee, Paul Tafforeau (2022)
DOI:10.1038/s41597-022-01353-y
Imaging intact human organs with local resolution of cellular structures using hierarchical phase-contrast tomography
C. L. Walsh, P. Tafforeau, W. L. Wagner, D. J. Jafree, A. Bellier, C. Werlein, M. P. Kühnel, E. Boller, S. Walker-Samuel, J. L. Robertus, D. A. Long, J. Jacob, S. Marussi, E. Brown, N. Holroyd, D. D. Jonigk, M. Ackermann, P. D. Lee (2021)
DOI:10.1038/s41592-021-01317-x
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